Solutions

Name Use Description
Hybridization Buffer

Nuclease S1 RNA protection

PIPES pH 6.4 - EDTA - NaCl

Hybridization Buffer

Nuclease S1 RNA protection

PIPES pH 6.8 - EDTA - NaCl - Formamide

Hybridization Buffer

RNAse protection

PIPES pH 6.4 - EDTA - NaCl - Formamide

Hybridization Buffer (Aqueous)

Southern blotting

Sodium Phosphate pH 6.8 - NaCl - MgCl2 - Denhardt's

Hybridization Buffer (Chromatin Immunoprecipitation)

Chromatin immunoprecipitation

SDS - EDTA - BSA - Sodium Phosphate pH 7.2

Hybridization Buffer - 20% Formamide

Southern blotting, low stringency

Formamide - SSC - SDS - EDTA - Denhardt's

Hybridization Buffer - 25% Formamide

Southern blotting, medium stringency

Formamide - SSC - SDS - EDTA - Denhardt's

Hybridization Buffer - 37.5% Formamide

Southern blotting, high stringency

Formamide - SSC - SDS - EDTA - Denhardt's

Hybridization Buffer - 50% Formamide

Southern blotting, very high stringency

Formamide - SSC - SDS - EDTA - Denhardt's

Hybridization Solution

Southern blotting

SSC - Dextran Sulfate - SDS - Denatured Salmon Sperm DNA

Hydroxylamine Buffer

Antibody labeling with maleimido dye

Hydroxylamine - EDTA - PBS

Hypotonic Buffer

RNAi in Drosophila

MgCl2 - Potassium Acetate

Hypotonic Lysis Buffer

Identification of novel protein kinase substrates

HEPES - EGTA - MgCl2

Hypotonic Lysis Buffer

Selection of polysomal RNA

KCl - MgCl2 - Tris-Cl pH 7.4 Cycloheximide

IEF Buffer

Coimmunoprecipitation of FLAG-epitope -tagged proteins

Urea - DTT - Pharmalyte - Triton X-100

IGEPAL CA-630 Lysis

Tissue/Cell Lysis 

NaCl - IGEPAL CA-630 - Tris-Cl pH 8.0

IGEPAL Lysis Buffer
IM, 10 X

Labeling in vitro with phosphorylated precursors

Imidazole Chloride pH 6.2, 50 mM
Imidazole Chloride pH 6.4, 50 mM
Imidazole Chloride pH 6.6, 50 mM
Imidazole Chloride pH 6.8, 50 mM
Imidazole Chloride pH 7.0, 50 mM
Imidazole Chloride pH 7.2, 50 mM
Imidazole Chloride pH 7.4, 50 mM
Imidazole Chloride pH 7.6, 50 mM
Imidazole Chloride pH 7.8, 50 mM
Immobilization Buffer

Electron microscopy

PBS - TWEEN® 20 - TCEP

In Situ Hybridization Staining Buffer (ZFIN)
Inclusion Body Lysis Buffer

Sarkosyl preparation of antigens from bacterial inclusion bodies

PBS - EDTA - DTT - cOmplete Protease Inhibitor Cocktail, EDTA-free

Inclusion Body Wash Buffer

Immobilized metal-ion affinity chromatography

Urea - NaCl - Triton X-100 - Tris-Cl pH 8.0

Infiltration Medium

For Agrobacterium

IPG DryStrip Rehydration Buffer (Urea + Thiourea)

Two-dimensional gel electrophoresis

Urea - Thiourea - DTT - CHAPS - Pharmalyte

IPG DryStrip Rehydration Buffer (Urea)

Two-dimensional gel electrophoresis

Urea - DTT - CHAPS - Pharmalyte

IPP150 Buffer

Tandem affinity chromatography

Tris-Cl pH 8.0 - NaCl - IGEPAL CA-630

IPP150 Calmodulin Elution Buffer

Tandem affinity chromgatography

Tris-Cl pH 8.0 - NaCl - IGEPAL CA-630 - Magnesium Acetate - Imidazole - EGTA - β-mercaptoethanol

IPP150 Calmodulin-Binding Buffer

Tandem affinity chromgatography

Tris-Cl pH 8.0 - NaCl - IGEPAL CA-630 - Magnesium Acetate - Imidazole - CaCl2 - β-mercaptoethanol

Isopropanol Fixing Solution

Fixation of proteins separated by SDS-PAGE

Isopropanol - Acetic Acid

Ketamine-Xylazine-Acepromazine Cocktail

Anesthetization of mice

Ketamine - Xylazine - Acepromazine

KFI, 10X

Isolation and amplification of RNA from single cells and small amounts of tissue

Tris-Cl pH 7.5 - MgCl2 - NaCl - DTT

Killing Buffer

For killing bacteria before RNA harvest

Kinase Buffer, 10X

Identification of novel protein kinase substrates

HEPES pH 7.4 - Magnesium Acetate - DTT

Klenow Buffer, 10X

Reaction buffer for DNA pol I Klenow fragment

Tris-Cl pH 7.6 - MgCl2

KLH Buffer

Cross-linking peptides to KLH with maleimide

Sodium Phosphate pH 7.2 - NaCl - EDTA - Sucrose

Krebs-Henseleit Buffer Modified

Basal salt mixture for tissue culture

Glucose - MgSO4 - KH2PO4 - KCl - NaCl

KSOM Culture Medium

In vitro culturing of mouse embryonic stem cells

NaCl - KCl - KH2PO4 - MgSO4 - Glucose - Penicillin G - Streptomycin - Sodium Lactate - NaHCO3 - Phenol Red - Sodium Pyruvate - CaCl2 - EDTA - L-Glutamine - BSA

KSOM Medium

RNAi in mouse oocytes and early embryos

NaCl - KCl - KH2PO4 - MgSO4 - CaCl2 - NaHCO3 - Sodium Lactate - Sodium Pyruvate - L-glutamine - EDTA - BSA - Gentamicin - Glucose

L-Cysteine pH 8.5, 50 mM

Blocking of sulfhydryl reactive groups after conjugation

L-Cysteine HCl

Label Buffer - Electron Microscopy

Electron microscopy

PBS - BSA

Labeling Buffer, 10X - Phage Display

Phage display

Hepes pH 7.0 - MgCl2 - MnCl2 - DTT - BSA

Laemmli Sample Buffer, 1X

SDS polyacrylamide gel electrophoresis of proteins

SDS - Glycerol - Tris-Cl pH 6.8 - Bromophenol Blue

Laemmli Sample Buffer, 2X
Laemmli Sample Buffer, 5X
Lambda Diluent

Dilution of bacteriophage λ

Tris-Cl pH 7.5 - MgSO4

Lambda Dilution Buffer

Diluting bacteriophage λ

Tris-Cl pH 7.5 - NaCl - MgCl2 - Gelatin

Lauryl Maltose Neopentyl Glycol - Cholesterol Hemisuccinate Tris
LB

Rich liquid medium for E. coli

Tryptone - Yeast Extract - NaCl.  Luria-Bertani Media

LiCl Buffer - Chromatin Immunoprecipitation

Chromatin immunoprecipitation

LiCl - IGEPAL CA-630 - Sodium Deoxycholate - EDTA - Tris-Cl pH 8.0

Ligase Buffer - Chromatin Immunoprecipitation

Chromatin immunoprecipitation

MgCl2 - DTT - ATP Tris-Cl pH 7.6

Ligation Buffer + ATP, 2X

Ligation of DNA

Tris-Cl pH 7.6 - MgCl2 - DTT - BSA - ATP

Ligation Buffer, 10X

DNA ligation

Tris-Cl pH 7.6 - MgCl2 - DTT - BSA

Low Calcium Buffer

Imaging exocytosis

NaCl - KCl - CaCl2 - MgCl2 - HEPES- EGTA pH 7.2

Low Salt Buffer (HSB)

Recovery of unincorporated dyes by HPLC

Triethylammonium Acetate pH 8.0 - Acetonitrile

Low Stringency Hybridization Buffer

Northern blotting

NaH2PO4 - NaH2PO4 - EDTA - SDS

Lowry Reagent A

Component of Lowry protein concentration assay

Copper-Tartrate-Carbonate - SDS - NaOH

Lowry Reagent B

Component of Lowry protein concentration assay

Folin-Ciocalteu phenol

Luminol Visualization Solution

Visualization of immunoblots with HRP-labeled antibodies

Luminol - p-Iodophenol - Tris-Cl pH 7.5 - H2O2

Lysate Buffer

Purification of high molecular weight DNA by spooling

Tris-Cl pH 8.8 - Ammonium Sulfate - BSA

Lysis Buffer

Electron microscopy

Tris-Cl pH 7.5 - NaCl - IGEPAL CA-630 - PMSF - cOmplete Protease Inhibitor Cocktail - Na3VO4 - NaF

Lysis Buffer

Isolation and amplification of probes for yeast DNA microarrays

Sorbitol - Tris-Cl pH 8.0 - EDTA

Lysis Buffer

Coimmunoprecipitation of FLAG-epitope -tagged proteins

Triton X-100 - Glycerol - NaCl - Tris-Cl pH 7.5 - EDTA - Protease Inhibitors

Lysis Buffer

Preparation of Drosophila embryo extracts

DTT - HEPES-KOH pH 7.4 - Magnesium Acetate - Pefabloc - Potassium Acetate

Lysis Buffer

RNA isolation and RT-PCR

Guanidine Thiocyanate - Tris -Cl pH 7.4 - β-mercaptoethanol

Lysis Buffer

Protein fragment complementation assays

Tris-Cl pH 7.6 - NaCl - SDS - EDTA - PMSF

Lysis Buffer 1

Chromatin immunprecipitation

HEPES-KOH pH 7.5 - NaCl - EDTA - Glycerol - IGEPAL CA-630 - Triton X-100

Lysis Buffer 1 - Yeast

Lysis of yeast cells for protein extraction

Tris-Cl pH 7.5 - KCL - EDTA - IGEPAL CA-630 - Glycerol

Lysis Buffer 1 Containing Protease Inhibitors - Yeast

Lysis of yeast cells for protein extraction

Tris-Cl pH 7.5 - KCL - EDTA - IGEPAL CA-630 - Glycerol - DTT - PMSF - Leupeptin - Chymostatin - Pepstatin - Aprotinin

Lysis Buffer 2

Chromatin immunoprecipitation

Tris-Cl pH 8.0 - NaCl - EDTA - EGTA

Lysis Buffer 2 - Yeast

Detergent-free lysis of yeast cells for protein extracts

Tris-Cl pH 7.5 - NaCl - EDTA 

Lysis Buffer 3

Chromatin immunprecipitation

Tris-Cl pH 8.0 - NaCl - EDTA - EGTA - Sodium Deoxycholate - Sarkosyl

Lysis Buffer for a 24-well Plate

Purification of high molecular weight DNA from mouse

Tris-Cl pH 8.5 - EDTA - SDS - NaCl - Proteinase K

Lysis Buffer for a 96-well Plate

Purification of high molecular weight DNA from mouse

Tris-Cl pH 7.5 - EDTA - NaCl - Sarkosyl - Proteinase K

Lysis Buffer for GST Pulldown

Use and labeling of GST fusions

Tris-Cl pH 8.0 - NaCl - EDTA - IGEPAL CA-630 - Protease Inhibitors

Lysis Solution - Yeast

Two-hybrid systems

Zymolase - Rescue Buffer (Tris-Cl pH 7.5 - EDTA - β-mercaptoethanol)

Lysozyme Solution

Isolation of total RNA from E. coli

Tris - EDTA - Lysozyme

M16 Culture Medium

In vitro culturing of mouse embryonic stem cells

NaCl - KCl - CaCl2 - KH2PO4 - MgSO4 - NaHCO3 - Sodium Lactate - Sodium Pyruvate - Glucose - BSA - Penicillin G - Streptomycin Sulfate - Phenol Red

M16 Culture Medium - Calcium Free

In vitro culturing of mouse embryonic stem cells

NaCl - KCl - KH2PO4 - MgSO4 - NaHCO3 - Sodium Lactate - Sodium Pyruvate - Glucose - BSA - Penicillin G - Streptomycin Sulfate - Phenol Red

M2 Culture Medium

In vitro culturing of mouse embryonic stem cells

NaCl - KCl - CaCl2 -KH2PO4 - MgSO4 - NaHCO3 - HEPES - Sodium Lactate - Sodium Pyruvate - Glucose - BSA - Penicillin G - Streptomycin Sulfate - Phenol Red

M2 Culture Medium - Calcium Free

In vitro culturing of mouse embryonic stem cells

NaCl - KCl - KH2PO4 - MgSO4 - NaHCO3 - HEPES - Sodium Lactate - Sodium Pyruvate - Glucose - BSA - Penicillin G - Streptomycin Sulfate - Phenol Red

M2 Lysis Buffer

Identification of novel protein kinase substrates

Tris-Cl pH 7.4 - NaCl - Glycerol - Triton X-100 - EDTA - EGTA - NaF - β-Glycerophosphate - Tetrasodium Pyrophosphate - Na3VO4 -  Aprotinin - Leupeptin - PMSF

M9 Buffer

Preparation and immunolabeling of C. elegans

KH2PO4 - Na2HPO4 - NaCl - NH4Cl

M9 Media

Minimal medium for E. coli

Na2HPO4 - KH2PO4 - NH4Cl - NaCl

M9 Medium (for Imaging)

LIve imaging of late-stage embryos/larvae from mouse, chick, Xenopus and C. elegans 

Potassium Phosphate Monobasic - Sodium Phosphaste Dibasic - NaCl - MgSO4

M9 Salts + CaCl2, 5X

Minimal medium for E. coli

Na2HPO4 - KH2PO4 - NH4Cl - NaCl - CaCl2

M9 Salts, 5X

M9 minimal salts, 5X concentrated stock

M9, 10X

RNAi in C. elegans

KH2PO4 - K2HPO4 - NaCl - MgSO4

MACS Buffer for Cell Separation

Separation of mammalian cells with magnetic beads

PBS - BSA - EDTA

MAL Indicator Medium

Solid indicator medium for maltose+/- S. cerevisiae

Yeast Extract - Peptone - Maltose - Bromocresol Purple - Agar

Maleic Acid Buffer

Dot and slot blotting of nucleic acids

Maleic Acid - NaCl

Malt Extract Agar (ME)

Rich media for S. pombe

Malt Extract - Agar

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