Solutions

Name Use Description
Buffer A (FPLC Mono Q)

Purification of proteins and inhibitors from cell culture

Tris-Cl pH 7.2 - DTT

Buffer B (FPLC Mono Q)

Purification of proteins and inhibitors from cell culture

Tris-Cl pH 7.2 - NaCl - DTT

Buffered Saline, 10X
Callus-Inducing Medium

Genetic manipulation of Arabidopsis

Gamborg's B5 Salts - Glucose - MES pH 5.7 - Agar - 2,4-D, Kinetin

CAPS Transfer Buffer

Western blotting

CAPS

Carbonate Developing Solution

Visualization of silver-stained proteins separated by SDS-PAGE

Formaldehyde - Sodium Carbonate

Carbonate-Bicarbonate Buffer

Preparation of Paraphenylenediamine Mounting Medium

Sodium Carbonate - Sodium Bicarbonate

Carnoy's Fixative

Sample fixation

Ethanol - Chloroform - Acetic Acid

Cartilage Staining Solution (ZFIN)
Cell Lysis Buffer

Isolation of total DNA from blood

Tris-Cl pH 8.0 - EDTA - SDS

Cell Lysis Buffer

Purification of high molecular weight DNA by spooling

Ttris-Cl pH 7.5 - NaCl - EDTA - Sarkosyl - Proteinase K

Cell Lysis Solution

Purification of high molecular weight DNA by spooling

Guanidium HCl - Sodium Acetate

Cell Resuspension Buffer

Genomic DNA purification

Tris-Cl pH 7.4 - NaCl - MgCl2

Chick ACSF
Cholesterol Hemisuccinate Tris - CHAPS
CIP Dephosphorylation Buffer, 10X

Dephosphoryation of DNA with calf intestinal phosphatase

ZnCl2 - MgCl2 - Tris-Cl pH 8.3

Citrate Binding Buffer

Preparation of mFc- and hFc-rusion proteins from mammalian cells

Sodium Citrate - NaCl - EDTA

Citrate Elution Buffer

Preparation of mFc- and hFc-rusion proteins from mammalian cells

Sodium Citrate - NaCl - EDTA

Citrate-Buffered Saline

Peptide arrays

Sodium Citrate pH 7.0 - NaCl - KCl

Cleavage Buffer - Hydroxylamine Fragmentation

In situ peptide mapping by hydroxylamine fragmentation

Hydroxylamine HCl - Guanidine HCl - Potassium Carbonate pH 9.0

CMFM (ZFIN)
Color Developing Solution

Peptide arrays

Citrate Buffered Saline - MTT - BCIP - MgCl2

Column Buffer

Imaging intermediate filament proteins in living cells

Urea - Sodium Phosphate pH 7.4 - NaCl - DTT - PMSF

Column Buffer

Buffer exchange of nucleic acid solutions with gel filtration

Tris-Cl pH 8.0 - EDTA - SDS

Column Buffer

Purification of intermediate filament proteins from bacterial inclusion bodies

Tris-Cl pH 8.0 - Urea - EDTA - DTT

Column Regeneration Buffer

Hydrophobic interaction chromatography

Tris - EDTA - NaCl - IGEPAL CA-630 pH 7.6

Column Storage Buffer

Hydrophobic interaction chromgatography

Tris - EDTA - NaCl - Azide pH 7.6

Column-Loading Buffer, 2X

Selection of poly(A) RNA from total RNA by oligo dT

Tris-Cl pH 7.6 - NaCl - EDTA - Sarkosyl

Compromise Restriction Buffer (B-ME), 10X

Restriction digestion of DNA

Tris-Cl pH 8.0 - MgCl2 - NaCl - β-mercaptoethanol

Compromise Restriction Buffer (DTT), 10X

Restriction digestion of DNA

Tris-Cl pH 8.0 - MgCl2 - NaCl - DTT

Coomassie Brilliant Blue Destain

Destaining Coomassie-stained protein in SDS PAGE gels

Methanol - Acetic Acid

Coomassie Brilliant Blue Destain - High Methanol

Destaining Coomassie-stained protein in SDS PAGE gels

Methanol - Acetic Acid

Coomassie Brilliant Blue Destain - Low Methanol

Destaining Coomassie-stained protein in SDS PAGE gels

Methanol - Acetic Acid

Coomassie Brilliant Blue Staining Solution

Protein staining in SDS PAGE gels

Coomassie Brilliant Blue R250 - Methanol - Acetic Acid 

Copper Tartrate Carbonate (CTC)

Lowry protein concentration assay

Copper Sulfate - Potassium Tartrate - Sodium Carbonate

Cortland's Salt Solution (ZFIN)
Cross-Linking Buffer A

Cross-linking antibodies to beads with imidoesters

Tris-Cl pH 8.0 - NaCl - EDTA - IGEPAL CA-630

Cryoprotective Agent

Cryopreservation of mouse sperm

Raffinose - Skim milk

Crystal Harvest Buffer

X-ray crystallography

mPEG 5000 - Bis-Tris Methane pH 6.5

CTAB DNA Extraction Buffer

Purification of high molecular weight DNA from plant cells

Tris-Cl pH 8.0 - EDTA - NaCl - CTAB - PVP 40000

Cytoskeleton Solubilization Buffer (Non-Reducing)
Cytoskeleton Solubilization Buffer (Reducing)
CZB Medium

RNAi in mouse oocytes and early embryos

NaCl - KCl - KH2PO4 - MgSO4 - CaCl2 - NaHCO3 - Sodium Lactate - Sodium Pyruvate - L-glutamine - EDTA - BSA - Gentamicin - Phenol Red

DAB Heavy Metal Stain (ZFIN)
DAB Solution (ZFIN)
DAB Substrate Solution for HRP

Chromogenic detection of horseradish peroxidase

Tris-Cl pH 7.6 - DAB Tetrahydrochloride - NiCl2

Danieau's Solution, 30X
DB

Denaturing Buffer, pH 8.5

Decalcifying Solution

Decalcification of tissues for paraffin embedding

Formic Acid - HCl

Denaturing Buffer Containing Guanidine Hydrochloride

Size exclusion chromatography

Urea - DTT - NaCl - Tris pH 7.5

Denaturing Buffer Containing Urea

Size exclusion chromatography

Urea - DTT - NaCl - Tris pH 7.5

Denaturing IMAC Buffer

Purification of denatured 6-His tagged proteins

NaH2PO4 - Tris-Cl - Guanidine HCl

Denaturing IMAC Buffer - 250 mM Imidazole

Purification of denatured 6-His tagged proteins

NaH2PO4 - Tris-Cl - Guanidine HCl - Imidazole

Denaturing IMAC Buffer - EDTA

Purification of denatured 6-His tagged proteins

NaH2PO4 - Tris-Cl - Guanidine HCl - EDTA

Denaturing IMAC Buffer - TCEP

Purification of denatured 6-His tagged proteins

NaH2PO4 - Tris-Cl - Guanidine HCl - TCEP

Denaturing Lysis Buffer

Denaturling lysis of cells before immunoprecipitation

Tris-Cl pH 7.5 - SDS

Denhardt's Reagent, 100X

Blocking reagent for nucleic acid hybridization

Ficoll - PVP - BSA

Denhardt's Reagent, 50X

Blocking agent for Southern blotting

Ficoll - PVP-40 - BSA

Dent's Fix

Imaging fixed tissue

Methanol - DMSO

Depolarizing Buffer

Imaging exocytosis

NaCl - KCl - CaCl2 - MgCl2 - HEPES pH 7.2

Deprotection Mix

Peptide arrays

TFA - TIBS - H2O - DCM

Detergent Buffer

Purification of intermediate filament proteins from bacterial inclusion bodies

Tris-Cl Ph 8.0 - NaCl - EDTA - IGEPAL CA-630 - Deoxycholate

Detergent Rinse

Immunohistochemistry of whole-mount mouse embryos

Sodium Phosphate pH 7.3 - MgCl2 - Sodium Deoxycholate - IGEPAL CA-630

Developing Solution

Mass spectrometry

Na2CO3 - Formaldehyde - Na2S2O3 

Developing Solution (for AP)

ELISA with alkaline phosphatase conjugate

DEA Substrate Buffer - pNPP

Dialysis Buffer

Purification of intermediate filament proteins from bacterial inclusion bodies

Sodium Phosphate pH 7.4 - β-mercaptoethanol - PMSF 

Dialysis Buffer

Purification of proteins and inhibitors from cell culture

Tris-Cl pH 7.2 - DTT - Glycerol

Diaminobenzidine Solution

Staining of hydrogen peroxide conjugates

DAB - H2O2 - Tris-Cl pH 7.6

Dietrich's Fixative (ZFIN)
Digestion Buffer

Isolation of mouse genomic DNA from mouse tails

NaCl - Tris-Cl pH 8.0 - EDTA - SDS

Digestion Buffer - Mass Sectrometry

Mass spectrometry

NH4HCO3 - CaCl2

Digitonin Extraction Buffer

Differential detergent lysis of cellular fractions

Digitonin - NaCl - PIPES pH 6.8 - MgCl2 - EDTA - PMSF

Dilution Buffer - Chromatin Immunoprecipitation

Chromatin immunoprecipitation

Tris pH 8.0 - EGTA - Triton X-100 - NaCl - Protease Inhibitors

Dimethyl Pimelimidate Solution

Hydrophobic interaction chromatography

DMP - Triethanolamine 

Disruption Buffer

Purification of proteins and inhibitors from cell culture

HEPES pH 7.2 - EDTA - DTT - Pepstatin - Leupeptin - Chymostatin

Dissasembly Buffer

Purification of intermediate filament proteins from bacterial inclusion bodies

Urea - Sodium Phosphate pH 7.2 - β-mercaptoethanol - PMSF

DNA Dilution Buffer

DNA hybridization analysis

SSC - Salmon Sperm DNA

DNA Extraction Buffer

Isolation of total RNA from fixed tissues

Tris-Cl pH 7.6 - EDTA - TWEEN 20 - Proteinase K

DNA Extraction Buffer (ZFIN)
DNA Gel-Loading Buffer Type I, 6X

Loading dye for electrophoresis

Bromophenol Blue - Xylene Cyanol FF - Sucrose

DNA Gel-Loading Buffer Type II, 6X

Loading dye for electrophoresis

Bromophenol Blue - Xylene Cyanol FF - Ficoll

DNA Gel-Loading Buffer Type III, 6X

Loading dye for electrophoresis

Bromophenol Blue - Xylene Cyanol FF - Glycerol

DNA Gel-Loading Buffer Type IV, 6X

Loading dye for electrophoresis

Bromophenol Blue - Sucrose

DNase I Buffer, 5X

Isolation of total RNA from E. coli

MgCl2 - Tris-Cl pH 7.5 - EDTA - DTT

DNase RQ1 Buffer, 10X
DNase Storage Buffer
Dounce Homogenization - Buffer A

Cell lysis by Dounce homogenization

HEPES-KOH pH 7.9 - KCl - MgCl2 - DTT - PMSF

Dounce Homogenization - Buffer B

Cell lysis by Dounce homogenization

HEPES-KOH pH 7.9 - KCl - MgCl2 

Dounce Homogenization - Buffer C

Cell lysis by Dounce homogenization

HEPES-KOH pH 7.9 - NaCl - Glycerol - MgCl2 - EDTA - DTT - PMSF 

Dounce Homogenization - Buffer D

Cell lysis by Dounce homogenization

HEPES-KOH pH 7.9 -KCl - Glycerol - EDTA - DTT - PMSF 

Drying Solution

Drying SDS-PAGE gels

Ethanol - Glycerol

E. coli DNA Polymerase I Buffer, 10X
Earle's Balanced Salt Solution (EBSS)
Earle's Balanced Salt Solution - Bicarbonate-Free, 10X
EB Extraction Buffer

Purification of high molecular weight DNA from plant cells

Tris-Cl pH 8.0 - EDTA - NaCl - β-mercaptoethanol

EBC Lysis Buffer

Coimmunoprecipitation

Tris-Cl pH 8.0 - NaCl - IGEPAL CA-630 - Leupeptin - Aprotinin - PMSF - Sodium Orthovanadate - NaF

EDTA Glycogen Solution, 20X
Egg Buffer (C. elegans)

Imaging of embryo development in C. elegans

NaCl - KCl - CaCl2 - MgCl2 - HEPES pH 7.2

Egg Salts Solution

LIve imaging of early embryos from mouse, chick, Xenopus and C. elegans 

NaCl - KCl - MgCl2 - CaCl2 - HEPES pH 7.4

Egg Water (ZFIN)

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